The Parallel Processing Resource for Biomedical Scientists at the Cornell Theory Center announces release of computer program for molecular and protein modeling:
The LOOPP program (Linear Optimization Of Protein Potentials). A program for potential optimization and alignments. LOOPP aligns sequence to sequence, sequence to structure, and structure to structure. It further enables the optimization of potentials and scoring functions for the above mentioned applications.
The code was developed by the groups of Ron Elber and Harold Scheraga and is released to the public domain. Although the code is not copyrighted, we expect you to reference the code to the extent that it helped you in your work. We further expect that this code will not be used as a whole or as a part of any commercial software. Contact the authors for proper references.
For additional information and to download the software, please go to http://www.tc.cornell.edu/reports/NIH/resource/CompBiologyTools/